Examples

Microscopy Demo

Best for: Microscopy users who don't already have detections for their data. This demo uses CellPose for segmentation and then DREEM to track the entities.

Runtime: 20 minutes

End-to-End Demo

Best for: Users who want to train their own models
Runtime: 20 minutes

A complete walkthrough of the DREEM pipeline: - Training a model from scratch - Running inference on new data - Evaluating tracking performance - Visualizing results and metrics

Getting Started

If you're new to DREEM, we recommend starting with the Quickstart example to get familiar with the basic workflow. Once you're comfortable, explore the other examples based on your specific use case.

For more details on configuration options and advanced usage, see the Usage Guide.